Convpaint

Convpaint leverages deep learning networks as pixel features extractors to perform image segmentation on a few brush strokes. It comes primarily as a napari plugin (napari-convpaint), but also provides a Python API for programmatic use. Since the napari plugin uses the API under the hood, you can use and combine both seamlessly.

Head to the Getting Started section to learn how to install the plugin and use its basics functionalities.

Have a look at some possible use cases in the Examples section.

In the API section, read the simple introduction on how to use Convpaint together with Python, or go through the more comprehensive Convpaint API tutorial to see how to use the plugin programmatically - and learn important details about the ConvpaintModel class that lies behind the napari plugin and API.

Head to the In-depth explanation section to learn how Convpaint works behind the scenes, and to read up about all the available parameters and settings as well as the provided feature extractor models.