repository

Index

A

add_channel_label() (microfilm.microanim.Microanimpanel method) (microfilm.microplot.Micropanel method) add_channel_labels() (microfilm.microplot.Microimage method) add_colorbar() (microfilm.microplot.Microimage method) add_element() (microfilm.microanim.Microanimpanel method) (microfilm.microplot.Micropanel method)

add_label() (microfilm.microplot.Microimage method) add_scalebar() (microfilm.microplot.Microimage method) add_time_stamp() (microfilm.microanim.Microanim method) ax (microfilm.microanim.Microanimpanel attribute) (microfilm.microplot.Micropanel attribute)

C

channelfile (microfilm.dataset.dataset.Data attribute) check_channel_time_available() (microfilm.dataset.dataset.Data method) check_input() (in module microfilm.colorify) check_rescale_type() (in module microfilm.colorify) cmaps_def() (in module microfilm.colorify)

color_translate() (in module microfilm.colorify) colorify_by_cmap() (in module microfilm.colorify) colorify_by_hex() (in module microfilm.colorify) colorify_by_name() (in module microfilm.colorify) combine_image() (in module microfilm.colorify) construct_figure() (microfilm.microplot.Micropanel method)

D

Data (class in microfilm.dataset.dataset)

dims (microfilm.dataset.dataset.Data attribute)

F

fig (microfilm.microanim.Microanimpanel attribute) (microfilm.microplot.Micropanel attribute)

find_files() (microfilm.dataset.dataset.Data method) findfiles() (in module microfilm.dataset.dataset) frame_generator() (microfilm.dataset.dataset.Data method)

G

get_channel_name() (microfilm.dataset.dataset.Data method)

H

H5 (class in microfilm.dataset.dataset)

I

initialize() (microfilm.dataset.dataset.H5 method) (microfilm.dataset.dataset.MultipageTIFF method) (microfilm.dataset.dataset.ND2 method) (microfilm.dataset.dataset.Nparray method) (microfilm.dataset.dataset.TIFFSeries method)

K

K (microfilm.dataset.dataset.Data attribute)

L

load_frame() (microfilm.dataset.dataset.Data method) (microfilm.dataset.dataset.H5 method) (microfilm.dataset.dataset.MultipageTIFF method) (microfilm.dataset.dataset.ND2 method) (microfilm.dataset.dataset.Nparray method) (microfilm.dataset.dataset.TIFFSeries method)

M

max_time (microfilm.microanim.Microanimpanel attribute) Microanim (class in microfilm.microanim) Microanimpanel (class in microfilm.microanim) microanims (microfilm.microanim.Microanimpanel attribute) microfilm module microfilm.colorify module microfilm.dataset module microfilm.dataset.dataset module microfilm.microanim module microfilm.microplot module

microfilm.version module Microimage (class in microfilm.microplot) Micropanel (class in microfilm.microplot) microplots (microfilm.microplot.Micropanel attribute) microshow() (in module microfilm.microplot) module microfilm microfilm.colorify microfilm.dataset microfilm.dataset.dataset microfilm.microanim microfilm.microplot microfilm.version multichannel_to_rgb() (in module microfilm.colorify) MultipageTIFF (class in microfilm.dataset.dataset)

N

ND2 (class in microfilm.dataset.dataset)

Nparray (class in microfilm.dataset.dataset)

O

output (microfilm.microanim.Microanimpanel attribute)

P

project_volume() (in module microfilm.colorify)

R

random_cmap() (in module microfilm.colorify)

random_grandient_cmap() (in module microfilm.colorify) rescale_image() (in module microfilm.colorify)

S

save_movie() (in module microfilm.microanim) (microfilm.microanim.Microanim method) (microfilm.microanim.Microanimpanel method)

savefig() (microfilm.microplot.Microimage method) (microfilm.microplot.Micropanel method) set_valid_frames() (microfilm.dataset.dataset.Data method) show() (microfilm.microanim.Microanim method)

T

TIFFSeries (class in microfilm.dataset.dataset)

time_range() (microfilm.microanim.Microanim method) time_slider (microfilm.microanim.Microanimpanel attribute)

U

ui (microfilm.microanim.Microanimpanel attribute) update() (microfilm.microplot.Microimage method) update_animation() (microfilm.microanim.Microanim method) (microfilm.microanim.Microanimpanel method)

update_params() (microfilm.dataset.dataset.Data method) update_timeslider() (microfilm.microanim.Microanim method) (microfilm.microanim.Microanimpanel method)

V

valid_frames (microfilm.dataset.dataset.Data attribute)

volshow() (in module microfilm.microplot)