napari-sediment#

napari-sediment is a napari plugin designed to perform the interactive analysis of hyperspectral image acquisitions of sediment cores. It has the following core functionalities:

  • visualization of hyperspectral stacks

  • an annotation tool to mask corrupted regions of the acquisitions

  • a selection tool to set subregions to use for analysis

  • both spatial and spectral dimensionality reduction

  • computations of different types of spectral indices

  • display and export of spectral indices plots